Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914893.1_cds_XP_016464840.1_57845
CDS Infomation

[gene=LOC107787736] [db_xref=GeneID:107787736] [protein=ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X3] [protein_id=XP_016464840.1] [location=join(7897..7956,8804..8880,10167..10267,11262..11332,11932..11994,13958..14002,14895..14960,15081..15128,15217..15312,15409..15450,16341..16547,16687..16818,16895..17128,17258..17344,17424..17738,18657..18802,18882..18972,19113..19154)] [gbkey=CDS]
Sequence

ATGCAAGAAGGGAAGATGTTATTCGCCAGGCTCGACGATTCGCCCATGTTTCGTCAACAG
ATCCAATCAATGGAGGAATGTGCTGAGACTTTGAGGGATAAATGTCTAAAGTTTTATAAA
GGATCTCGAAAGTACACAGAAGGGCTCGGAGAGGCATATGATAGAGACATTGCTTTTTCC
AGTTCACTTGAAACCTTTGGAGGAGGGCGTCATGATCCCATCTCTGTTGCATTTGGAGGC
CCTGATATGGCCAAATTTGCTATCGCTCTGAGAGAAATTGGAACATACAAAGAAGTTCTT
CGATCACAGGTAGAGCATGTATTAAATGATCGATTACTTCATTTGGCAACCATTGATCTT
CAAGATGTAAAGGAAGCTCGGAAGCGTTTTGACAAAGCTAATGTTGCTTATGATCAGGTT
CGAGAGAAGTTTTTGTCATTGAGGAAAAGTACTAGGATGGATATAGCTGCAGCCATTGAG
GAGGAACTTTACAATGCAAGGTTGACTTTTGAGCAAGCCCGCTTTAATCTGGTCGGTGCT
CATTCTGCGGTTGAGGCCAAAAAGAAGTATGAATTGTTGGAAGCTGTTGGCAGTATGATG
GACACTCATCTTCGGTATTTCAAACAGGGGTATGAACTTTTGCATCAAATGGAGCCTTAT
ATCAACCAGGTCTTGGCTTATTCGCAAAAAGCTCGAGAAAGTTCCATGTATGAGCAGGCA
GCTCTCAATGAGAGGATGCAAGAGTACAGAAGGAAAATAGATCAAGAAAGGAGACGTTCG
TTCAATGGGTCTCCAAATGGTGATGTCACACAACCTTTTTCCAGGAGTTCTCACAAACTT
ATAGAAGCAGTCATGCAATCTGCAGCTGAAGGAAAGGTACAAACTATAAAACAAGGATAC
CTGTCAAAGCGTTCTTCTAATTTAAGAGGTGACTGGAAGAGAAGATTCTTTGTTCTAGAT
AGCAGAGGAATGCTGTACTACTATCGAAAACAATTGAGCAGACCGTCTTTTCAGGGTTCT
GGCAGCCCACTCCTTTCACACAGATGTTCTTCCCCAGAACCGGGAGCAGGACTGCTGAGT
CGTTGGCTTTCTTCTCATTATCATGGAGGTGTACATGAGGAAAAAACTGTTGCACGTCAC
ACAGTGAACCTACTGACATCAACAATAAAAGCGGATGCAGATCAGTCTGATCTGAGATTT
TGCTTCAGAATAATTTCACCAACAAAGAATTATACTTTGCAGGCAGAGAGTGCAGCAGAG
CAGATGGACTGGATAGAAAAAATAACAGGAGTTATTAGTTCGTTGCTAAGTTCCCAGACA
CCTGAAAGGCATTTCTCTGCTAGTCCCACTAGCGAAAGTAGTTCTATAGGAAGTCCCATT
GATCATGATCAAAGAGCAACGGAAGAGTACACATCTGGGAGGGATCTTACTGGTAGATCT
TTCATACGCCCATCCAAAAGTTCAGTGCATATTCTCAGCACGAAAATAGAGAAACCAGTT
GAAGCACTAAAAAGGATACCTGGGAATGATAAATGTGCTGATTGTGGTGCTCCTGGACCA
GAATGGGCTTCTTTAAATCTTGGAATTCTTATATGCATTGAATGTTCTGGTGTTCACCGG
AACTTTGGTGTACATATATCCAAGGTCAGATCTTTGAAACTTGATGTTAAAGTGTGGGAG
CCTTCAGTCATAACGTTCTTTGAGGCACTGGGTAATGTGTTCGTGAATTCTATTTGGGAG
GAGCTGTTGCATGCAAGAAAAACATTTCAGGCTGATGAAATACCAATGCGGTTTTTTGAG
TCTGAAAAACACAAACAGTTCTTTGGCAAACCCAGTTATGCGGATCATATTTCAGTAAAG
GAGAAATTCATTCATGCAAAGGTTGGTGGACATCGCACGTTCTGCCTAAGAGTGACTGTA
TAG

Peptide Sequence

PEP ID

XP_016464840.1
PEP Infomation

PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X3 [Nicotiana tabacum]
Sequence

MQEGKMLFARLDDSPMFRQQIQSMEECAETLRDKCLKFYKGSRKYTEGLGEAYDRDIAFS
SSLETFGGGRHDPISVAFGGPDMAKFAIALREIGTYKEVLRSQVEHVLNDRLLHLATIDL
QDVKEARKRFDKANVAYDQVREKFLSLRKSTRMDIAAAIEEELYNARLTFEQARFNLVGA
HSAVEAKKKYELLEAVGSMMDTHLRYFKQGYELLHQMEPYINQVLAYSQKARESSMYEQA
ALNERMQEYRRKIDQERRRSFNGSPNGDVTQPFSRSSHKLIEAVMQSAAEGKVQTIKQGY
LSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQLSRPSFQGSGSPLLSHRCSSPEPGAGLLS
RWLSSHYHGGVHEEKTVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAAE
QMDWIEKITGVISSLLSSQTPERHFSASPTSESSSIGSPIDHDQRATEEYTSGRDLTGRS
FIRPSKSSVHILSTKIEKPVEALKRIPGNDKCADCGAPGPEWASLNLGILICIECSGVHR
NFGVHISKVRSLKLDVKVWEPSVITFFEALGNVFVNSIWEELLHARKTFQADEIPMRFFE
SEKHKQFFGKPSYADHISVKEKFIHAKVGGHRTFCLRVTV

Transcript Sequence

Gene sequence data has not been registered.